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Hemp J, Han H, Roh JHyeob, Kaplan S, Martínez TJ, Gennis RB.  2007.  Comparative genomics and site-directed mutagenesis support the existence of only one input channel for protons in the C-family (cbb 3 oxidase) of heme-copper oxygen reductases. Biochemistry. 46:9963–9972.
Suits A, Kim M-H, Shen L, Zhang B, Tao H, Martinez T.  2007.  Conformationally controlled chemistry: Excited state dynamics dictate ground state dissociation. APS Meeting Abstracts. 1:26006.
Kim MHwa, Shen L, Tao H, Martínez TJ, Suits AG.  2007.  Conformationally controlled chemistry: excited-state dynamics dictate ground-state reaction. Science. 315:1561–1565.
Tao H, Martinez T.  2007.  Conformer-selected photodissociation: Ab Initio Multiple Spawning Dynamics of Excited Propanal Cation. APS Meeting Abstracts. 1:26007.
Hudock H, Levine B, Martinez T.  2007.  Excited State Dynamics of DNA and RNA bases. APS Meeting Abstracts. 1:26007.
Levine BG, Martínez TJ.  2007.  Isomerization through conical intersections. Annu. Rev. Phys. Chem.. 58:613–634.
Virshup A, Martinez T.  2007.  Photoisomerization selectivity in conjugated pi-bond systems through local microenvironment. APS Meeting Abstracts. 1:26006.
Chen J, Martínez TJ.  2007.  QTPIE: Charge transfer with polarization current equalization. A fluctuating charge model with correct asymptotics. Chemical physics letters. 438:315–320.
Chen J, Martinez T.  2007.  Representing molecules as atomic-scale electrical circuits with fluctuating-charge models. APS Meeting Abstracts. 1:19005.
Martinez T.  2007.  Towards Modeling Coherent Control in Ab Initio Multiple Spawning Methods. APS Meeting Abstracts. 1:26010.