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Publications

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Author Title [ Type(Desc)] Year
Journal Article
Makhov DV, Glover WJ, Martínez TJ, Shalashilin DV.  2014.  Ab initio multiple cloning algorithm for quantum nonadiabatic molecular dynamics. The Journal of chemical physics. 141:054110.
Levine BG, Martínez TJ.  2009.  Ab initio multiple spawning dynamics of excited butadiene: role of charge transfer. The Journal of Physical Chemistry A. 113:12815–12824.
Tao H, Levine BG, Martínez TJ.  2009.  Ab initio multiple spawning dynamics using multi-state second-order perturbation theory. The Journal of Physical Chemistry A. 113:13656–13662.
Sisto A, Glowacki DR, Martínez TJ.  2014.  Ab Initio nonadiabatic dynamics of multichromophore complexes: a scalable graphical-processing-unit-accelerated exciton framework. Accounts of chemical research. 47:2857–2866.
Sisto A, Glowacki DR, Martínez TJ.  2014.  Ab Initio Nonadiabatic Dynamics of Multichromophore Complexes: A Scalable Graphical-Processing-Unit-Accelerated Exciton Framework. Accounts of chemical research.
Kulik HJ, Luehr N, Ufimtsev IS, Martínez TJ.  2012.  Ab initio quantum chemistry for protein structures. The Journal of Physical Chemistry B. 116:12501–12509.
Hattne J, Echols N, Tran R, Kern J, Gildea RJ, Brewster AS, Alonso-Mori R, Glöckner C, Hellmich J, Laksmono H et al..  2014.  Accurate macromolecular structures using minimal measurements from X-ray free-electron lasers. Nature methods.
Harmand M, Coffee RN, Bionta MR, Chollet M, French D, Zhu D, Fritz DM, Lemke H, Medvedev N, Ziaja B et al..  2013.  Achieving few-femtosecond time-sorting at hard X-ray free-electron lasers. Nature Photonics. 7:215–218.
Henighan T, Bonetti S, Granitzka P, Zhu D, Parkin S, Trigo M, Reis DA, Durr H.  2014.  Acoustic Pulses in Iron Observed by Femtosecond X-ray Diffraction. Bulletin of the American Physical Society. 59
Lee SH, Cavalieri AL, Fritz DM, Myaing M, Reis DA.  2004.  Adaptive dispersion compensation for remote fiber delivery of near-infrared femtosecond pulses. Optics letters. 29:2602–2604.
Lee SH, Cavalieri AL, Fritz DM, Myaing M, Reis DA.  2004.  Adaptive dispersion compensation for remote fiber delivery of NIR femtosecond pulses. arXiv preprint physics/0406081.
Gaffney KJ, Liu SH, Miller AD, Szymanski P, Harris CB.  2000.  The adsorbate electron affinity dependence of femtosecond electron dynamics at dielectric/metal interfaces. Journal of the Chinese Chemical Society. 47:759–763.
Reis DA, Biedron S, Decker G.  2003.  Advanced photon source ultrafast X-ray mini-workshop.
Bogan MJ, Boutet S, Chapman HN, Marchesini S, Barty A, W Benner H, Rohner U, Frank M, Hau-Riege SP, Bajt S et al..  2010.  Aerosol imaging with a soft x-ray free electron laser. Aerosol Science and Technology. 44:i–vi.
Stoupin S, Terentyev SA, Blank VD, Shvyd'ko YV, Goetze K, Assoufid L, Polyakov SN, Kuznetsov MS, Kornilov NV, Katsoudas J et al..  2014.  All-diamond optical assemblies for a beam-multiplexing X-ray monochromator at the Linac Coherent Light Source. arXiv preprint arXiv:1401.5879.
Davis CE, Bogan MJ, Sankaran S, Molina MA, Loyola BR, Zhao W, W Benner H, Schivo M, Farquar GR, Kenyon NJ et al..  2010.  Analysis of volatile and non-volatile biomarkers in human breath using differential mobility spectrometry (DMS). Sensors Journal, IEEE. 10:114–122.
Grilj J, Sistrunk E, Koch M, Chergui M, Guehr M.  2013.  Analytical & Bioanalytical Techniques. Analytica. 2013
Meyer M, Radcliffe P, Tschentscher T, Costello JT, Cavalieri AL, Grguras I, Maier AR, Kienberger R, Bozek JD, Bostedt C et al..  2012.  Angle-resolved electron spectroscopy of laser-assisted Auger decay induced by a few-femtosecond X-ray pulse. Physical review letters. 108:063007.
Ilchen M, Glaser L, Scholz F, Walter P, Deinert S, Rothkirch A, Seltmann J, Viefhaus J, Decleva P, Langer B et al..  2014.  Angular momentum sensitive two-center interference. Physical review letters. 112:023001.
Fuchs M, Trigo M, Chen J, Ghimire S, Shwartz S, Kozina M, Jiang M, Henighan T, Bray C, Ndabashimiye G et al..  2015.  Anomalous nonlinear X-ray Compton scattering. Nature Physics.
Doumy G, Roedig C, DiMauro L, Cavalieri A, Grguras I, Meyer M, Costello J, Helml W, Maier A, Kienberger R et al..  2015.  Applications of laser streaking at X-ray free electron lasers. Bulletin of the American Physical Society. 60
Sun Z, Zhang W, Ji M, Hartsock R, Gaffney KJ.  2013.  Aqueous Mg2+ and Ca2+ Ligand Exchange Mechanisms Identified with 2DIR Spectroscopy. The Journal of Physical Chemistry B. 117:12268–12275.
Bakhoum SFW, Bogan MJ, Agnes G.  2005.  Archiving and absolute quantitation of solutes separated by single charged droplet coulomb explosion. Analytical chemistry. 77:3461–3465.
Fink J, Thirupathaiah S, Ovsyannikov R, Duerr HA, de Jong S, Huang Y, Huisman R, Golden MS, Gloskovskii A, Zhang YZ et al..  2010.  ARPES studies on FeAs-based superconductors and their parent compounds.
Hau-Riege SP, Boutet S, Barty A, Bajt S, Bogan MJ, Andreasson J, Iwan B, Seibert MM, Hajdu J, Sakdinawat A et al..  2009.  Arresting sample explosion for X-ray imaging.

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